DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_059416c
Line Availability available from NASC (N670776) and ABRC (SALK_059416c)
Confirmed for Hit At1g27400
Parent of DUPLO pair none
Parent of pair(s) 515

Gene hit At1g27400

 
Sequence (A. th genome BLAST matches underlined) 
ACACTTTCATAATCTCTGTGATTTTTTCGCTTCAAGCTGAAACTGTTATTGGCTTACCTC
GGCCTATGCAATGAGTATTCATTGAAATGGTTTCGATTGGTTTTGCGTTTGCAGCTTGCA
AGGCGAGAGGAGCCGATCTCAGGGTCCACTTCAAGGTAAATTTCTTGTACTGATTCCGGA
TCTCAAAAATGAATTAGATTAAGTGATTTTCCTATGGGGATTAAGCTGCACCGGGCCCAT
CNNAAACACAAAANATNNNNNCNNATGGCCCTTCTGGGGCCACTTATCTGGATTAGTAGG
CTTTAAAAAGCCCAATTATGTGCTGGTAACACCCCGACTTGTAGGCTAAAACCCTCGGAA
CTTGTTTCACATCGAGACAACTCTTTTAGACTTTTCTCAGTAACAAAAACACCGAACCCT
AGATTTTCTTTCACCTGAATCTGAAGATGGAG
GenBank Accession CC054397 [GenBank]
Graphic View Graphic view of gene At1g27400
Predicted Position of Insertion Chr1:9515372 - go to primer design
BLAST e Value 1e-102
Hit Clone Code (BAC ID) F17L21
Hit Gene Code At1g27400 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribosomal protein L22p/L17e family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CC054397 [GenBank]


Last Updated on Thursday, 10 June 2021 13:37