DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_122435c
Line Availability available from NASC (N681679) and ABRC (SALK_122435c)
Confirmed for Hit At3g49840
Parent of DUPLO pair 12050
Parent of pair(s) none

Gene hit At3g49840

 
Sequence (A. th genome BLAST matches underlined) 
ATGAAAACTTTTACCTGATTAATGATAAGAGTTACAAGAATGACAATCCCAATAGACATT
GCACCGATATAGTAAAACGCAACTGATTTGCTAAGTCTAGAAGCCAAACTCAGTAACACT
ATCCCCATGATTAAAAACACAATCCGGTATATGAAAAACTCTGCAAATACAAACTCTACT
TTGTTTAGTTTTAGAATTTTGCAAAACACAAAACAACACAAGCACTCTACCTTGTTTAGC
AACCAACTCCACGGTGCTGACATTAGATGAGCCACCAAATGTTCTTATATCAAGAATCTT
ATAGTCAAAAGGTGACATTATCCCAACCCAAGGTAACCCTTTGGACACTCTCTTCCACTG
ATTATCAGGACACATTCCAATTGCACGCGACGAATT
GenBank Accession BZ353968 [GenBank]
Graphic View Graphic view of gene At3g49840
Predicted Position of Insertion Chr3:18485518 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T16K5
Hit Gene Code At3g49840 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transmembrane protein (DUF2215)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BZ353968 [GenBank]


Last Updated on Thursday, 10 June 2021 13:37