DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_144505c
Line Availability available from NASC (N664231) and ABRC (SALK_144505c)
Confirmed for Hit At3g15640
Parent of DUPLO pair 2302
Parent of pair(s) none

Gene hit At3g15640

 
Sequence (A. th genome BLAST matches underlined) 
CATGTGTCCAGAGCCGTCTTCAATGTTGGACCCTATCTTATAGTGAGGCTTTATTGTGTA
AACAATTTGGTCATTCATCTGATGTGGAAGAATGACTTAACAATCCAACTCTTCTCCTGA
CACTTGCCCATTACGATGGAAATGACGACTGCGACGTGGTTTTATACCGCAACCCCTTTG
AATGCCCGGTTTGCACTCAGTACTTTGAGGTAAGTGAAAGTCGTATCAGATACTCTACTC
ACGAAATAAATCGACCTAGCCTCTCATTTCATAGTCATAGGCCAGACGAATCTGTCAAAG
GATTAGAGCAAGAACTCATTAAGCTTTCGAATTGCAGCCCGANNCNNTCNACAAA
GenBank Accession CC797127 [GenBank]
Graphic View Graphic view of gene At3g15640
Predicted Position of Insertion Chr3:5301107 - go to primer design
BLAST e Value 2e-80
Hit Clone Code (BAC ID) MSJ11
Hit Gene Code At3g15640 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Rubredoxin-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37