DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_006410c
Line Availability available from NASC (N665176) and ABRC (SALK_006410c)
Confirmed for Hit At1g20580
Parent of DUPLO pair 213
Parent of pair(s) none

Gene hit At1g20580

 
Sequence (A. th genome BLAST matches underlined) 
AAGAGCTCATCACTGGGTGTTGGCAGAGGTAGAGGTGCAATGCGAGGGAAAGTAAGTTCA
CCCTCTCTCTCTTATGATTTAGTGCTCATGAATGCAATGTTAGGAAGTTTTATGGAACTT
GTTAAGATGTTCAAATCCTTGTTATCCCTTAATGGTTTGTTTCTTCTTTGTCACTACTAA
TGGTTAGATTCTTGAATCTTTGTGATATTATCTTAAAGCCGGCTGCCGGGCCCGGGCGTG
GAACTGGAGGAAGGGGAGCGGTACCACCTGTGAGGAGATGATTGATTTTACGCTCAACAT
GTAAGCT
GenBank Accession ED607522 [GenBank]
Graphic View Graphic view of gene At1g20580
Predicted Position of Insertion Chr1:7130091 - go to primer design
BLAST e Value 1e-173
Hit Clone Code (BAC ID) F5M15
Hit Gene Code At1g20580 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Small nuclear ribonucleoprotein family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37