DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_151986c
Line Availability available from NASC (N667631) and ABRC (SALK_151986c)
Confirmed for Hit At1g33280
Parent of DUPLO pair 2622
Parent of pair(s) none

Gene hit At1g33280

 
Sequence (A. th genome BLAST matches underlined) 
NGGGGGNNNNTNNNTTGTTNNNNGAGAACAAANNATTCTCTAGTCCCGCTGGGGGGCCTA
CAGAATGTGGGGAGCCTCTGTGGCGACTATAACACACACTCTTGAAGATGACGGTAACAA
CTCTTCTTCCACGGTCCAGCCACCTTCTAATCTGCTTTCATTGCGCGGTGAAAATGGATT
TCTTGGGTTGTTTTAAACAGATGCTGATAATGTTATATGTATGGATCTCTTCGTATGTAA
GTTCTTCGACTACATGTACCCATTTATTTCATTTCTGCAATTGGAACCGAATTGCTTCAC
TGAAAAAGTTAATAAGAATATTTTTCTACTCCACACGGCCTGCTTTCGTTGGCTGGGGAG
CCCCACCCCTCCCACCGTTATGAGTTCCATATTGTAAGGCTACCTCCCCCACCACAACCC
AAAACCCCCATGTAATTTATAATACCGATGGTGGTCGCCTCATGTAGAGTCCCCGCCCTA
CTTAAGGTGTAGTTTACTTTGCTAATAATAGAACGTAGACACCCAACCCAACCCCATCGA
CCTCCCCCCCCCACCCCATCCCCCCCCTCCTCCA
GenBank Accession CC888528 [GenBank]
Graphic View Graphic view of gene At1g33280
Predicted Position of Insertion Chr1:12073739 - go to primer design
BLAST e Value 7e-94
Hit Clone Code (BAC ID) T16O9
Hit Gene Code At1g33280 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NAC domain containing protein 15
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37