SimpleSearch - Line and FST details
Line specific information
| Line ID | 010H02 |
| Vector Used | pAC106 |
| Line Availability | available as T3 set from NASC (N400950) |
| Segregation Analysis | 59:54:49 |
| Confirmed for Hit | MGH6 At1g78130 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 732, 7944 |
Gene hit MGH6
| Sequence (A. th genome BLAST matches underlined) | >11-K118207-0022-010-H02C-3144 CACTATCCTTCGCAGAACCTTTCTCCATATAAGGAAGTTCATTTTCATTTGGAGAGGACA GGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCGGTTTAAACTATCAGTGTTTGATC CACAATGCAATTGAATCATTGTTTTCAGTATTCATGTTGAGTTCAGTTTAATCGGTTTGA TTTCAAGATGTGCTCATTCATGTCTTAGATATGTATCTTTAAACCAAACTTTTCAGCTCA ACTAGAACATGTCATCGCCTCAACATAGTGGAGATCAAGAAAAGTGGCATGTGACTGTTT GAGTTTTAAGAAATAGGCAAAAATACATGTTATAAAGTTTGCAAGTTTATCACTGCCTTA CGAAGTTAGATCAGCACTAATTTCCCACTCACTTGCCAAAATGCTAATATAAAATATGGG AACAAAGATACTATTGATTGGATTCTGCAGATGAAAAAAAGGTGTCGCAATCATCCAACT TAGGCATCT |
| GenBank Accession | HG967695 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:4116279 - go to primer design |
| BLAST e Value | 1e-164 |
| Hit Clone Code (BAC ID) | MGH6 |
| Insertion Classification | Genome Hit |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At1g78130
| Sequence (A. th genome BLAST matches underlined) | >46-K016930w-022-010-H02T-8409 TCCTGGCCAGCTCCCGGCGGTCTCTCCTGGAGCGGGCGATCTTCACACAAAAAACTTGCG TGCCACTCAGTCGCGTGCAGGACGGTACCGCTGTTTGGCCTAGTCCTGATCGTCGCGTGC TGACGCGAAACATAGCCCAGCCAGACACTAGCAGAGCTCTTGCCCATGAAGTAATGAGCA CCGGTACTACCGCTGCTCACATATAGTGGGATCTATCTTGCCATCGATTGCACCTCCTAT AGTAGGAATCCTGGCACCCACGCTTATGGATACAAGCCAATCCCTGAAGGGTCATCGAGG TCAACAGAGATAGCCACAGATAGAGAGAATGCAGCATCTCTGGCAAAAGCTCTTTATACA TCTATAGGACTCCCAATGGCGGCTTGCTGCTTCATATACTCCTTTCTTTACCGTTCCTAT CCTCTATGGGACCTCCCCNAATAGTGAGAAANNTNNTATANATTCTGANATGCTTNAACT TCTTCCAAAAAGTTCCAATCNAGACATTGAGTTTTCACAAAAAAAAGACCCCTTTGCAAA CCATGTTAACCCCAATTTACAAGCTATGGGATCCTCCCCTAAAGTGAGAGGGGAAAAAAG GAGAAAGAAACGAAAAA |
| GenBank Accession | BX572112 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr1:29401270 - go to primer design |
| BLAST e Value | 1e-99 |
| Hit Clone Code (BAC ID) | T11I11 |
| Hit Gene Code | At1g78130 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Major facilitator superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | BX572111 [GenBank] BX572112 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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