SimpleSearch - Line and FST details


Line specific information

 
Line ID 895G12
Vector Used pAC161
Line Availability available as T3 set from NASC (N485908)
Segregation Analysis 50:49:37
Confirmed for Hit At4g13070
Parent of DUPLO pair none
Parent of pair(s) 1205, 1631, 8015, 80789
Note

Gene hit At4g26050

 
Sequence (A. th genome BLAST matches underlined) 
>17-K104847-0022-895-G12C-3144
CCTTGCAGACCCTTCCTCTATATAAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCC
GGGGATCAGATTGTCGTTTCCCGCCTTCGGTTTAAACTATCCATATATACGTGTTGTTCG
TAATAGTTACATACCTCTTTGGAATCTGTCCTCGTCCACTAGCAAAATTGTCAAAAACAA
AAAGGAAAAAACCCTTATCAAAAGATAAATTTTTGGATTCGATTGATGACATATTGTATA
TAGAACGGTAAAGATTTTTAAAAACGATTAAACTCTGAATCTCTTAAACTTTATATACGT
GTGTGTGTAGTGTGTAGTGTGTAGGTAGTGTGTACCACTTAAAACTTTAAAAATTGTATC
ACTCATTTATTTATTTTTCTGATGGCAGAAAATTCCGGAATCTCTAGTAGCGAGAATGTT
AAATTTGTGGGCATTGGATTTGCAATCCAATCAGCTAAAAACTCTTCCAAACTCCATTGG
ATGTCTTTCCAAACTTAAGTTTCTTAATGTCTCCGGAAATTATCTCCAATCTCTCCCCAA
AACTATAGAAGATTGCAGGTAAGACCACTT
GenBank Accession LN713446 [GenBank]
Graphic View Graphic view of gene At4g26050
Predicted Position of Insertion Chr4:13211678 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F20B18
Hit Gene Code At4g26050 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation plant intracellular ras group-related LRR 8
Insertion Classification CDSi
Confirmation Status failed
Other FSTs Supporting this Hit CR935680 [GenBank]

Gene hit At4g13070

 
Sequence (A. th genome BLAST matches underlined) 
>95-K030226-022-895-G12-8409
AACAGAGTATTATAACTAACCTCCTAAGCTACAAACAGGTTACATTGACTAATACAATGT
TAAGACGTAACCTTTTCAAGCTTGTAACGAATTCTAACTTCGGGGTTTGGAGAATTCATC
TTCTTTTTAGCCTTCAGACGATAAAACCTTAACTCATTCACTTTAGCTTTTCTTGACAAT
TTAGCCCGTTTCCATTTCTTCTCTTTTCTTGTAGGTATGGGATCCTCCCTATAGTGAGAC
NTATTACTCACTCCCTTTTCATCTTACCGCTAATAACAT
GenBank Accession CR935679 [GenBank]
Graphic View Graphic view of gene At4g13070
Predicted Position of Insertion Chr4:7622395 - go to primer design
BLAST e Value 4e-98
Hit Clone Code (BAC ID) F25G13
Hit Gene Code At4g13070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RNA-binding CRS1 / YhbY (CRM) domain protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37