GABI DUPLOdb - pair details


Details for pair 1631
  
  Pair Info Parent 1 Parent 2
Pair ID 1631    
Parent loci   At5g05850 [Araport] [TAIR] At4g26050 [Araport] [TAIR]
Gene Annotations   plant intracellular ras group-related LRR 1 plant intracellular ras group-related LRR 8;
Pair-related paper(s)  
Similarity (TAIRv10) 37.2 %    
Gap (TAIRv10) 40.4 %    
Component 1    
Genetically unlinked Yes    
Assigned allele   SALK_072332c / At5g05850 895G12 / At4g26050
Insertion classification   CDSi CDSi
Parent line's graphic view   Graphic view of gene At5g05850 Graphic view of gene At4g26050
Parent line's confirm. status   confirmed, show confirmation seq's Failed
Primer and wt-amplicons   show primer details not done or failed
 
Doublemutant ID 1631/1a4.02.16
NASC set ID N2102827
Assigned allele   SALK_018793c 895G12
Allele genotype in parent   Het Het
Allele genotype in DM   Hom Hom
Comment(s) and/or quirks Not a true DUPLO pair because the two ORFs display an aa-sequence similarity below our threshold, or at least one of the two genes has no annotated ORF (e.g. transposable elements or pseudogenes).

 

Last Updated on Thursday, 06 December 2018 16:11