DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_018700c
Line Availability available from NASC (N667882) and ABRC (SALK_018700c)
Confirmed for Hit At1g79160
Parent of DUPLO pair 168
Parent of pair(s) none

Gene hit At1g79160

 
Sequence (A. th genome BLAST matches underlined) 
CACGCCTCGATTGGTCTTGTCGCATTGAAGGATCCGCCTCCTCCTTTCCTGCCGTGGTTT
TGGCTGATTAAATCGTACCACTGCTGCTATTTTTGGCTCCAGGGAAATCGTTTTTCCCCC
CTCGCTCTTCTTCGAGCCCGCCTACTATCCCTACCACAGACCTGACCTCTCACAACCGTA
CCAACGATTCCATCGATTTGAATTTTCCTCCTCGGACGGATAGCTATTCTCCTTAGGTGA
ACCTCTTCCAGAATCCATCTCCGGAGCTGAAGCTGCTTCCGTCGTCTCGATCTCTCTCGT
GCGAACACTAATGCTTTACAGAGTGTATGCACACTGGACAAGGTGAATTCAGCTGCTTAC
TAGGGCATATTAGAGATCCTGCTATGTTCAAGACACGTCTATCTCCGGATGATACGGTTT
ACTATCTTACTTGACGGAGGCTGTAGCGTCTCCGGTGGTTGCCGGATGTC
GenBank Accession CC052629 [GenBank]
Graphic View Graphic view of gene At1g79160
Predicted Position of Insertion Chr1:29780263 - go to primer design
BLAST e Value 5e-48
Hit Clone Code (BAC ID) YUP8H12R
Hit Gene Code At1g79160 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation filamentous hemagglutinin transporter
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37