DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_046367c
Line Availability available from NASC (N656454) and ABRC (SALK_046367c)
Confirmed for Hit At5g53840
Parent of DUPLO pair 12104
Parent of pair(s) none

Gene hit At5g53840

 
Sequence (A. th genome BLAST matches underlined) 
CCCGCAATGGGTGTTANNTTAAGTTCGTGCTAAGGCGCTCAACTTGTGTTCTCCACGCAC
ATATATGATGCCGGGCCACGTCCACAGCGCCCTGCGCCCTGGCGTGACGTCTAGTCGCAG
CCCTTTACAGNGTCGTATTACACTCTGGCCCGTCGTCATGGGCCGTGCCCTGTAGCCCTG
CTGTCCTTTTTTGTGAGTATCACCCTCCGTGTTCCACAAAATGCCGAATAGCCCATAACG
TTCGTCATCTTGCCTGTTTACCGGGAGACCCTCCCTGACGTGGTCTGCGCACCCTTGCAC
CGATTCTGCTACCTGTCCGATTTGAGGCTGTTTGCTCTATCTCTAGTCCGGAAATGCTGC
TAACTCTTCTTTTGAGCTGCCCGCAACTACAATCTCCCTACTTGCTGCCGAATTGCTTGA
CCCTCTCTAAAGCCAAGCTCTTTTTGGTGACGCTTCGCTATTCTCTCTTGCTTTCTCGTC
TCT
GenBank Accession CC794256 [GenBank]
Graphic View Graphic view of gene At5g53840
Predicted Position of Insertion Chr5:21859640 - go to primer design
BLAST e Value 6e-20
Hit Clone Code (BAC ID) MGN6
Hit Gene Code At5g53840 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box/RNI-like/FBD-like domains-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37