DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_087836c
Line Availability available from NASC (N656728) and ABRC (SALK_087836c)
Confirmed for Hit At5g40710
Parent of DUPLO pair 2200
Parent of pair(s) none

Gene hit At5g40710

 
Sequence (A. th genome BLAST matches underlined) 
ATGAGATACTTCACAGCAACAACAAAGATCAATGAGAAAACTCTACAGATTTGCATAAAA
AATAATAAAAACCACTGCTTTCAATTCATACCTCTTGAATGATTTTCCAAGCAACTCTGC
TACGTTCTCTTGAACAATGAATCTCATGAAAACCGTCTTCAGGATCTTTAAAACCCTGTA
GAACAACAACCACAAAGCTTCAAAATTTGAACAAAATCTAGAATT
GenBank Accession CC055219 [GenBank]
Graphic View Graphic view of gene At5g40710
Predicted Position of Insertion Chr5:16295538 - go to primer design
BLAST e Value 1e-125
Hit Clone Code (BAC ID) MNF13
Hit Gene Code At5g40710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation zinc finger (C2H2 type) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CC055219 [GenBank]


Last Updated on Thursday, 10 June 2021 13:37