DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_087882c
Line Availability available from NASC (N666648) and ABRC (SALK_087882c)
Confirmed for Hit At5g17810
Parent of DUPLO pair 12811
Parent of pair(s) none

Gene hit At5g17810

 
Sequence (A. th genome BLAST matches underlined) 
CGCAAGGTCTCTTCGACCAATGAACTCAATATTTTACAAAATTACTCAAAAGTGGAGTTA
TTGGTTCTTGTGTTTTTGGCTATATTCTTTATTTTTAAAAATAAATAATATATACTACAT
ATTTATATTTATCAAAACTTGGACCAAATAAAAAAGGTCACATATATACATCCATATATA
TGAGCTGCATCAATCCGTAAAGCTTAGTTTAAATCACCAAAAAATTTTCCTCTTTTCCCA
AATTTTTTTAAAACAAAACCCCGGGGGGCGGCGAAAAAAAAAAGGGCGGGGGGCCCCCAA
TAAAGCCGGACTTTAATTAAAAAAAAAATATCCCGCGCCGTTGCTATTTTATTCACTTAT
TTTATCACTTTTATTTTTTTTTAATATTTACCCCCTAACCACCTTTCTTTGATCCCGCCC
TACGCCTCCCCCC
GenBank Accession CC795682 [GenBank]
Graphic View Graphic view of gene At5g17810
Predicted Position of Insertion Chr5:5880824 - go to primer design
BLAST e Value 6e-32
Hit Clone Code (BAC ID) MVA3
Hit Gene Code At5g17810 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation WUSCHEL related homeobox 12
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37