DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_100861c
Line Availability available from NASC (N653771) and ABRC (SALK_100861c)
Confirmed for Hit At4g15020
Parent of DUPLO pair 11703
Parent of pair(s) none

Gene hit At4g15020

 
Sequence (A. th genome BLAST matches underlined) 
ATCACCACATTTTGTAATCACTTGAACAATATTGGTACTGCAAACTTCTTCAATCAGATC
GCAAGATAATTCGCACAGTTGATAAATAGAAGTATAAAACCTCGTATGCGTCCACATATT
TCAGTAAACACTACCTGTTTCAGGTCAATCTGACCAACTTGTTGAGATCTTTAAAGCCTT
TATCAAGNTACAGTTCCTCATCGATAATAGAACAGCCAGTGCCTCTTCCACATCGCTTTG
CATTCATCAATCTCTTTCGCCATCTCCTCAACACTATTCTTCATTATCCACCCTCGAAGG
TCATCATGCGTGGGAGCAGATACCCCGAATCCTCCAGAGGCAATGGCATCGATCATCGGT
TGGAAATTAACA
GenBank Accession ED602613 [GenBank]
Graphic View Graphic view of gene At4g15020
Predicted Position of Insertion Chr4:8576813 - go to primer design
BLAST e Value 1e-100
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g15020 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hAT transposon superfamily
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37