DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_101859c
Line Availability available from NASC (N668761) and ABRC (SALK_101859c)
Confirmed for Hit At1g21200
Parent of DUPLO pair 12249
Parent of pair(s) none

Gene hit At1g21200

 
Sequence (A. th genome BLAST matches underlined) 
CTAGTGGGGGCCACTACGTGCCATTGCGTTGGTAAACGCTTTGCTTGCGATCTTCTTCTT
CACAGACCGCAGCGGTAGTTGTGGCCAATCAGTCGCGATGCTGTGGTACATTCTATTCTG
GCTATGCAGCACATCATCCCCAAGACTCCATGAATCAGCATGCATCGACACAATCCTAAT
TCTAGACCACTTCATGAAGGTCTTCCCTTTACTATGGTTACAGGTCAAACCTGTGATCAT
CATCAGAATCAGAACATGTCTATGTCTGAGCAACAGAAAGCTGAAAGAGAGAAGAATTGC
AGCCCGGGCCCGTCGACCAATCTTACCCTATAATGACTCATAAAGATACAAATTACGGGC
CCTCCCTGCCTACCAATATNNCCCATATAAAACTCATAAAGATTCACCTAGGGGCCCATT
TTTGCTTCCNTTTTCCCTTTCAACTTCCTTAGGATTATCTCCCCTCACAGGCCTGGCGTT
TAGGGGTTCTGAATATTACCCCAAAAAAAACACTTAACCCATTTCGCTACCCTAAGAAAT
CTTGAACCCATTTAATGGACTAAAGGAGNGGGGNCCCAACAGCGGGCCGATTTTTGA
GenBank Accession BZ762363 [GenBank]
Graphic View Graphic view of gene At1g21200
Predicted Position of Insertion Chr1:7421569 - go to primer design
BLAST e Value 2e-81
Hit Clone Code (BAC ID) F16F4
Hit Gene Code At1g21200 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation sequence-specific DNA binding transcription factor
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37