DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_122484c
Line Availability available from NASC (N660144) and ABRC (SALK_122484c)
Confirmed for Hit At1g48450
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g48450

 
Sequence (A. th genome BLAST matches underlined) 
GGCCAAAGTNTCCGACTTTTTGCTTCTCCCAGAGGCTAATCATGGACGCTGTGGCGGCGA
ATTTGTTTCAATCTCCTTCCTTACTGCGTCAAACTTCCGAAAGGTTGATATTTTCGACGC
CCAACTGTCCTGGCTTCATGCGAATTAGCTCCGGACCTCAATTTCGTCTCAGAGTAGGTC
TTATTTCTACTGAGTTTGATTTACTAAACCCTAGACAACATTGACATTTATAGCTTTCCC
GAATCATCTTTGTTTGTGCTTAATCTACCCCCATATCGTATATCTTCC
GenBank Accession BZ354000 [GenBank]
Graphic View Graphic view of gene At1g48450
Predicted Position of Insertion Chr1:17910385 - go to primer design
BLAST e Value 1e-150
Hit Clone Code (BAC ID) T1N15
Hit Gene Code At1g48450 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation alanine-tRNA ligase, putative (DUF760)
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit ED604983 [GenBank]


Last Updated on Thursday, 10 June 2021 13:37