DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_150241c
Line Availability available from NASC (N657856) and ABRC (SALK_150241c)
Confirmed for Hit At2g30290
Parent of DUPLO pair none
Parent of pair(s) 836, 84525, 84529, 84533, 84536, 84538

Gene hit At2g30290

 
Sequence (A. th genome BLAST matches underlined) 
TTGCCAATTCTTGTCTTGTGCCATTAATAGCTCTTATCTCTGAGACCATATATGTCTGCA
CACCCATCCCCACACAAAACTATCAAAAAAGAGTATATTCTCTATTAAGGGACAAAGCAA
TATAAAGATTTTAGATATATGACTACTTTAATTGCGGGCCGGACCTACGAGCGCACGAGT
TTTATAAAAAATTATAAAAGTCCACTTCTTTGCCCTTTTAAAAAGGCTTCTATTGGGGCC
TCACTTCCGTGTTTTATTTTAAANTATTTNATTTTTAGTTGAAAGCGGCGGCCCGGGCCG
GCGACCACGGGTGGCAAAAAAAAAAACAAAAGGCGCGGGGGGGGCCCCCTCNNNCNGNNN
CNNNNNNCCNCCCCAANNCNNNNNNNCCATNNNNNNNNNNNNNTTNNNNNNNNNNAANAT
AAATTGAAGANCA
GenBank Accession CC887502 [GenBank]
Graphic View Graphic view of gene At2g30290
Predicted Position of Insertion Chr2:12912947 - go to primer design
BLAST e Value 8e-16
Hit Clone Code (BAC ID) T9D9
Hit Gene Code At2g30290 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation VACUOLAR SORTING RECEPTOR 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CC887502 [GenBank]


Last Updated on Thursday, 10 June 2021 13:37