GABI DUPLOdb - pair details


Details for pair 2115
  
  Pair Info Parent 1 Parent 2
Pair ID 2115    
Parent loci   At3g48890 [Araport] [TAIR] At5g52240 [Araport] [TAIR]
Gene Annotations   membrane-associated progesterone binding protein 3 membrane steroid binding protein 1;
Pair-related paper(s)  
Similarity (TAIRv10) 65.3 %    
Gap (TAIRv10) 15.1 %    
Component 2    
Genetically unlinked Yes    
Assigned allele   270C03 / At3g48890 SALK_035827c / At5g52240
Insertion classification   CDSi Promoter
Parent line's graphic view   Graphic view of gene At3g48890 Graphic view of gene At5g52240
Parent line's confirm. status   confirmed, show confirmation seq's confirmed, show confirmation seq's
Primer and wt-amplicons   show primer details show primer details
Doublemutant ID 2115/1a2.26.28
NASC set ID N2102929
Assigned allele   270C03 SALK_035827c
Allele genotype in parent1   Hom  
Allele genotype in parent2     Hom
Allele genotype in DM1   Hom Hom
Comment(s) and/or quirks DNA insertion type of at least one parent allele is not CDSi (mostly caused by a change in the gene structure annotation of the targeted gene).

 

Last Updated on Thursday, 06 December 2018 16:11