DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_008144
Line Availability available from NASC (N508144) and ABRC (SALK_008144)
Confirmed for Hit At5g18040
Parent of DUPLO pair none
Parent of pair(s) 59644

Gene hit At5g18040

 
Sequence (A. th genome BLAST matches underlined) 
CTCTAGGGCAGGCGGTGAAGGGCAATCAGCTTGTTGCCCGNTCTCACTGGGTGAAAAGAA
AAACCACCCCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTTAAT
TTGGACAGGGCCTCGGAAACTCCCTACCACTCGAGATAAAAGGGTGAATATGATAAAATA
AAATCTTGTAAATGTTGATTAAAAATCTTCTGAATTTAGGACATAAAAGATTCGACTATA
CAGTTTTGAAGGGGCTGGCAGGGACGTCGAGCACGCTTGCCCCATAGTGAGGGGTAACAA
CAGGTTAAACGGTTCATCCAAAATCTTAAGCTCAATCACTTCTCCTTTCATGGGGACGCG
GGGGATGGGACAAGCAAATGGGGGAACCTTGAATGGACATCCCAAATGGGGCCAATGGTC
TCTTCTTGGGAGCCCTTTTTTGAAAGCACATTCAAGGGAGTTTTTGACAGGGAGGGGGTG
GTCCCTCTCCCTGGACATTTTAACTCTTAATCCAGAAATTTTCCACCATATACTGATGCA
AGGTTTTCAAAGTGAACTGAAAACTTGGTTC
GenBank Accession ED609242 [GenBank]
Graphic View Graphic view of gene At5g18040
Predicted Position of Insertion Chr5:5973559 - go to primer design
BLAST e Value 2e-72
Hit Clone Code (BAC ID) MCM23
Hit Gene Code At5g18040 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation target of trans acting-siR480/255 protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit ED609239 [GenBank] ED609242 [GenBank]


Last Updated on Thursday, 10 June 2021 13:37