DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_020314c
Line Availability available from NASC (N661731) and ABRC (SALK_020314c)
Confirmed for Hit At5g54270
Parent of DUPLO pair none
Parent of pair(s) 6786, 83100, 83106, 83111, 83115, 83118, 83120, 83122

Gene hit At5g54270

 
Sequence (A. th genome BLAST matches underlined) 
CAACACCGGCAATTGGTCAAGCATTCACTCTGGCTCAGGTAGGTATACTCACTTGCTGTT
TTAAGCTGCAGCCCCGCCAGTCAAAACCGCTGATGCCTATAACCTTCTACCAAACCCATG
AGGATCACTTGGAAGCCAAGGACGGCTAAAATGCTCTGAGCATGGACTAGGTTTGGGTTG
CCTAAGTAGTCCAAACCGCCTTCGGAGAAGATTTGTGAACCGGCTTTGAACCAGACTGGT
TCTTTGAAGTCCACACGGACCCACTTTTGAAGAACTTCAGGGGTTATGCAACCAAAAGCT
CCCAACATTGCCCATCTCCCATGGATCACCTGCAAATGATGATTAGTTATTTACTCTGTT
TTTACATTGAGTGAGTGAGATTTAGAGACTAACCTCAAGAGCTCTGTTTTTGGCAAAGGC
TTCAAGGTCTGCGGATAAACCGGCGGTGTCCCAACCATAATCGCC
GenBank Accession BZ286966 [GenBank]
Graphic View Graphic view of gene At5g54270
Predicted Position of Insertion Chr5:22039102 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MDK4
Hit Gene Code At5g54270 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation light-harvesting chlorophyll B-binding protein 3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37