DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_043690c
Line Availability available from NASC (N665884) and ABRC (SALK_043690c)
Confirmed for Hit At5g54680
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g54680

 
Sequence (A. th genome BLAST matches underlined) 
TTGGAATCCAGAGAAATTAGAGTGGTTTTCACGCGCACTCTTCCTTTTTTTTTGGGCTTT
CCAAGGCCCATCATACCAAGGGTTTTTATTTTATTTGTAAGTTAATTTTTAATTCATTTT
ACGGGTTTTTATTTTATTTTATGGGTTACATCATCATATATATATTAAATCAAATATCAA
TACATTTTACAACAAACTTAACTAATCAGGGCATTAACCTAGTGAATT
GenBank Accession BH754656 [GenBank]
Graphic View Graphic view of gene At5g54680
Predicted Position of Insertion Chr5:22217056 - go to primer design
BLAST e Value 3e-23
Hit Clone Code (BAC ID) MRB17
Hit Gene Code At5g54680 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37