DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_051124c
Line Availability available from NASC (N670712) and ABRC (SALK_051124c)
Confirmed for Hit At3g14990
Parent of DUPLO pair 2632
Parent of pair(s) none

Gene hit At1g52810

 
Sequence (A. th genome BLAST matches underlined) 
TAGCGCCGGGGGGGTCGACCACCCGTCGCTGCTTTGGATGAGTAGTAATGCTTCTCGTGG
GGCGTCATCGCACACGGGGGGTCGACCACCCCTGCTGCTTATTGATGCGTAATAATGCTC
CACCTGAGGCTTCATCGGGTCTGCTAGGTCGACCACATGGTGTTTAGTATTATTATTGTT
GAAATACGCCCTGTTCGAATGGGTTGATTGGATCTTGTTGAAGAAAATAATTTATACTTT
TGGTCCTGTCATAATGAAAATGAAACGTTGTACGGATAGAACCCGATTCTTGCGCGGTTA
ATTGGATCACATTGATGACCACGATTAGAACTTTTTATCCTATCGCGTTGAAAATGTGAG
TTTGTCACTTACGAGCCTATCCTGGCTTGATTTATAGCACATTATCACTTTGATCAGTGA
GATAT
GenBank Accession queueing for submission to ENA/GenBank
Graphic View Graphic view of gene At1g52810
Predicted Position of Insertion Chr1:19666948 - go to primer design
BLAST e Value 1e-32
Hit Clone Code (BAC ID) F14G24
Hit Gene Code At1g52810 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Insertion Classification 5' region
Confirmation Status unknown

Gene hit At3g14990

 
Sequence (A. th genome BLAST matches underlined) 
ACTATTTTAGCCGCATTAGTGACACTTCTTTCTTCTCCACTACTCTCCATTTCTCTTTCT
TCTTGACTCAACCATGGTTTCTCTCTTCTCCGGATCTATGGCTTCATTTACGATAACGGT
GTGTGGGGTTTCTCGATCCCGATATCATACTTTTTTCCCTCCTCGTACGTTACGA
GenBank Accession BH908900 [GenBank]
Graphic View Graphic view of gene At3g14990
Predicted Position of Insertion Chr3:5047508 - go to primer design
BLAST e Value 9e-29
Hit Clone Code (BAC ID) K15M2
Hit Gene Code At3g14990 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Class I glutamine amidotransferase-like superfamily protein
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37