DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_063337
Line Availability available from NASC (N563337) and ABRC (SALK_063337)
Confirmed for Hit At3g56710
Parent of DUPLO pair 926
Parent of pair(s) none

Gene hit At3g41762

 
Sequence (A. th genome BLAST matches underlined) 
CGCCCTTTCATCTCGGGCACTCAGCAATTTTTGTCCGAGAACTGCTGAA
GenBank Accession BH792298 [GenBank]
Graphic View Graphic view of gene At3g41762
Predicted Position of Insertion Chr3:14196200 - go to primer design
BLAST e Value 2e-13
Hit Clone Code (BAC ID) F21A14
Hit Gene Code At3g41762 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At3g56710

 
Sequence (A. th genome BLAST matches underlined) 
ATAGAATCGATGCTTCCAAAGTCATTGACATTGTAAAACCCATTAGAGAAAAACCCAGAA
AAACCTGCCGACATCTGATCAGGTAAAAACATGTCTTCCGCATTCAACGGCTCATAACAA
TCACTGTCTCTCTCACCGAACGGCTCCTGATGAAGAACACGTGGCGCAAGATTCTCCGCC
GGGGAGAAAGGTTGTGGTCGTCGGAGGAAGGNGGAAATAGATGGGCTCCGGNTGAAGATC
GACGGCGTCTTGGCCTGTGAGTTCTTGAACGAGCTCTCTGAACTTAGAAGCACAAGTTTG
AACTCTCATGGGGTTTGAGATGTAACGAACTTTGATGGGTTTATTCNTCGAAGTCGTCTT
CTTCTTTTGCGTTTGGGATTTTCTTGAAACCGGAGAT
GenBank Accession ED593819 [GenBank]
Graphic View Graphic view of gene At3g56710
Predicted Position of Insertion Chr3:21007057 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T8M16
Hit Gene Code At3g56710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation sigma factor binding protein 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37