DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_070821c
Line Availability available from NASC (N666386) and ABRC (SALK_070821c)
Confirmed for Hit At1g56080
Parent of DUPLO pair 2542
Parent of pair(s) none

Gene hit At1g56080

 
Sequence (A. th genome BLAST matches underlined) 
CGGTGACTTCAACCTCTCCGACGAGATTCTCGCCGTGATTCCCACCGACCCTTATGATCA
ACTCGACCTCGCCAGGAAGATCACTTCCATGGCTATCGCTTCAAGGGTTTCGAATCTGGA
ATCTCAAGTCTCCGGCTTGAGACAGAAGCTGNGTAGGAGAGCGGTAATGGNTTCACGTAG
GGGCCATCGTGAGGCGTGAGTTCACGTAGAGNAGCGATCGTCGAGGGTTGGGTAACGTGA
TCGACTCCCTCGCGTAAATCTTAGGGTGAATTGCATGATCCAAGTGTGGCTTTTACTCCA
TTGGGTGAATTTTTGGATTTTTGGA
GenBank Accession BH850108 [GenBank]
Graphic View Graphic view of gene At1g56080
Predicted Position of Insertion Chr1:20976201 - go to primer design
BLAST e Value 8e-80
Hit Clone Code (BAC ID) T6H22
Hit Gene Code At1g56080 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation interactor of constitutive active ROPs protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37