DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_079096
Line Availability available from NASC (N579096) and ABRC (SALK_079096)
Confirmed for Hit At3g60320
Parent of DUPLO pair 6821
Parent of pair(s) none

Gene hit At3g60320

 
Sequence (A. th genome BLAST matches underlined) 
CTCNATCGNAGNTTCANCCNATTGAAGAGTGAGTTCTATTGTTCGTTCTGTTTTCTTTCT
TTGATAACTTGGATTATCCTGCTTTTATGAAATTGAGTTTGTGACATTGTGAATTTTGTT
TATTAGAAACGGTGATTCATTCGAGTAGTTTATTAAGCAACTTGAGCTCGACATGGACCT
CGAAGCCGCCATTGGCAGTCAAGTATAGGATAGACACGACTGCGCTGGATCAACCGAACA
GTTCGAAGAGCCTTTGTTCCACTCTTGACCGTCTCTTGGCATGGGAGAAGAAGCT
GenBank Accession BH856823 [GenBank]
Graphic View Graphic view of gene At3g60320
Predicted Position of Insertion Chr3:22294064 - go to primer design
BLAST e Value 1e-157
Hit Clone Code (BAC ID) F27H5
Hit Gene Code At3g60320 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation bZIP domain class transcription factor (DUF630 and DUF632)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g26660

 
Sequence (A. th genome BLAST matches underlined) 
GAACCGCTAAAAAGATTTGTAACGGTTGGAAACATTTTTACATGTATTGATTGATTCATC
TTTTCCTGAATT
GenBank Accession ED597319 [GenBank]
Graphic View Graphic view of gene At4g26660
Predicted Position of Insertion Chr4:13451922 - go to primer design
BLAST e Value 5e-34
Hit Clone Code (BAC ID) T15N24
Hit Gene Code At4g26660 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation kinesin-like protein
Insertion Classification TS2TE (3')
Confirmation Status failed


Last Updated on Thursday, 10 June 2021 13:37