DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_145035c
Line Availability available from NASC (N660242) and ABRC (SALK_145035c)
Confirmed for Hit At5g48850
Parent of DUPLO pair 2089
Parent of pair(s) none

Gene hit At5g48850

 
Sequence (A. th genome BLAST matches underlined) 
ATATTGTCCCCAGTTGTTGAACAAAAGAGATCTGGTCGTCTTTTTGGTCTAGAGGTAGCC
CTGGGCGTAGGAGATAATTCTTTGCACCCAACGGTGAGGGATCTCCTCTACATTTTCCGA
AAAACTATGCAAAAAGTCTTTTCGGTTATGAGATAATATAAGTCTTCAAATTTTTTATTG
GCCGGCCCATCCAAACATATCCAAATTGCGCAAAGACCTGAATACATTTCTATCTGACAA
GAGTAACGGAATCGGTCATCAACAATGAGTAGGTCTTAAAGTCGGTGGCAGTCGATATAG
AAGAACCCGAGATGGCNACACTGGCGGTTTGGAAAGCCTCACCACTGGAGAGCGATGAAA
CAGTGCCCCCAGGACATGGCTGTTGAATGAAACACTTGCCCTTCTGAAGACTATTGAACA
TACAAAACTTTCC
GenBank Accession CC797511 [GenBank]
Graphic View Graphic view of gene At5g48850
Predicted Position of Insertion Chr5:19806773 - go to primer design
BLAST e Value 2e-34
Hit Clone Code (BAC ID) K24G6
Hit Gene Code At5g48850 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Tetratricopeptide repeat (TPR)-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37