DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_150134c
Line Availability available from NASC (N686977) and ABRC (SALK_150134c)
Confirmed for Hit At3g60630
Parent of DUPLO pair 6762
Parent of pair(s) none

Gene hit At3g60630

 
Sequence (A. th genome BLAST matches underlined) 
GCAATCGCTGTGGGCCAGTGTCTGTGGGGAATATATAACCGCCCGCTGCATTCTCATACA
TGCGCGCAAGGTGTGATTACAGTCTGTGCAAAGGCGTCAATTTGTTGTTGCCACTGTCTA
AAAGGCGCCACCTTGTTACCGACTCCCCTTCTGCCTGAGCTATGGACAACGCTTGAGGAG
ATTTGCTTGTTGAAACGAATTATCTGTGGGAGGTAACCCGAAAACATGGGACTGATTGTT
ACATTTGCATCGATTGCTTCTTTCTCCGAAGAACCGAATAAAGACAGTGGCCCACAAGTT
GGATTCAAAAAAATCTCCTAATTTAAGAGCTCGATTTCCAAGGAGACACCTGTTTCTTCG
GCGAAGCTTCCCACATTTTCTTCAATCAATCCTAACTCAAAATGCAGCCCAAACCGACAA
CCAAACGAGCTCTGTGGGGGGGGGGAAAAATTTANNACGGCCCCACAANANTGAANTGGG
NNNTTTTGGGNGNNNNTNNNCCCTTNNNNANNNCNAAAAATANNNNNNNGGGANAATCTT
GTCCCCCTGGC
GenBank Accession CC887429 [GenBank]
Graphic View Graphic view of gene At3g60630
Predicted Position of Insertion Chr3:22410920 - go to primer design
BLAST e Value 2e-29
Hit Clone Code (BAC ID) T4C21
Hit Gene Code At3g60630 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GRAS family transcription factor
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37