DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_151487c
Line Availability available from NASC (N653798) and ABRC (SALK_151487c)
Confirmed for Hit At3g56880
Parent of DUPLO pair 1389
Parent of pair(s) none

Gene hit At3g56880

 
Sequence (A. th genome BLAST matches underlined) 
GCCAACCAGGCGTGTTTCCAGTGAGGGTGATATACACCAAGCGTTTTGCGGGATCAACGC
GTGCTAATCCCTCCGACGACGCCATGATTGTTAAGTAAGTAAATCACCGGAGAAGAAGAG
AAAAGAGAATCTTTTTTAGTGGATCATTATTGTTGAGCTCTGTTTTTAGAGAGAGAGAGA
GAGTGAGTAAAGGAATGTGATAATGAATGAATTGGAGAAATGAAAGCTGAGGAGAGATAA
TATAAATAGGACGGCGAAGAGAGAGAGAGAGAGAATGAGAAACCGCGTGGAGAAGAGAGA
GAAAGGAGAACACACGCGTCAGCAGAATTGTACGGAACTCTGACTCAGCTCTGTTTTTTT
CGTCTTATATATTAAACCCATTTTTCTTGACTCTCTATCTAATCTCTGTATTATTACACC
ACCGCGGGCCCTATAGGGCAGCGTAATGACCCACGGG
GenBank Accession ED605767 [GenBank]
Graphic View Graphic view of gene At3g56880
Predicted Position of Insertion Chr3:21060078 - go to primer design
BLAST e Value 1e-82
Hit Clone Code (BAC ID) T8M16
Hit Gene Code At3g56880 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation VQ motif-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37