DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_151601c
Line Availability available from NASC (N664343) and ABRC (SALK_151601c)
Confirmed for Hit At1g53290
Parent of DUPLO pair none
Parent of pair(s) 2369, 97541

Gene hit At1g53290

 
Sequence (A. th genome BLAST matches underlined) 
AACCAAATCACTCTCACTAACGTTTTGTAAGGAAGCTGCAGCCCGGGCCGATCAACAAAA
AGANNNNNTTNNTTNNNNNTTAGAAAGGTGGATCGCGCCCCCACCCAACGAAAAAAGGCC
CNCTTTNTGNGCCCCTGAGAGAGGGGCATCNAGGCTTCCCCACAAAAANATTTTNNNNTT
TTAAAATTTTTTTTTTNNTGTTTCTTTTTTTTTTAGTATTCATGTGGTTTTTTTTTTACC
ATCGCCCCCCCAACCACGACTCTTTTTTTTTTGGGATATTGGTTCCCCCTTTAGAAAAAA
AAACAAGCGGGGGGGGGGGGGGGCANTTTACTCTACGAGTTTTAGCTGCCCCTAATATAC
TAACCGCTCCCTTGTGGTGGGGTGTCGTCATTTGTATCTTGTTAGGTGTATGTCGTGAAT
CACCTGTTATCG
GenBank Accession CC888249 [GenBank]
Graphic View Graphic view of gene At1g53290
Predicted Position of Insertion Chr1:19872243 - go to primer design
BLAST e Value 3e-12
Hit Clone Code (BAC ID) F12M16
Hit Gene Code At1g53290 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Galactosyltransferase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37