DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_017008c
Line Availability available from NASC (N660324) and ABRC (SALK_017008c)
Confirmed for Hit At2g39820
Parent of DUPLO pair 1374
Parent of pair(s) none

Gene hit At2g39820

 
Sequence (A. th genome BLAST matches underlined) 
GTCCGTTTTTGTTTCCGACACATAGACTACCAATAGTCCCTGATCCTCCTATGGAAGTAG
TAACAATTGGGATAACACCTTTTAACTTCGACTCATAACCACTACAAATAAATTAATTAA
AATTACAAGTCATAGAAAAACCAAACTTGTACGTGAAAACTTAATTAGACAATGTGAAGA
CTCAAGAGTGTATGTATGTATATATACGTGAAGAAGTTTGCGGAGGCAGATGTTGCGGAA
ACGAGACAATAAGCATTTGTGAGTTTGGAAAAGACACCAATTTCGCAATTATTGTTATCA
TATTGAAGACCTGCCGAAAACAAGAACAGAAAAAAAAAGAACAATCCTGTAAGCAACTTG
AAAAGAAAGCATCGTATAAAAAGCTAAAGCT
GenBank Accession ED576578 [GenBank]
Graphic View Graphic view of gene At2g39820
Predicted Position of Insertion Chr2:16618873 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T5I7
Hit Gene Code At2g39820 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Translation initiation factor IF6
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37