DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_103627c
Line Availability available from NASC (N686593) and ABRC (SALK_103627c)
Confirmed for Hit At1g79170
Parent of DUPLO pair 97834
Parent of pair(s) none

Gene hit At1g79170

 
Sequence (A. th genome BLAST matches underlined) 
TATTGTGTGGTGTCATCATAAGCAACGGCTGAGACAGTGGTACTATTAGCATCGTCGCTA
TACTTAACCTGGACAACACTTTTCTCTTGTTATGTCTGTCCATAAACCATACAAAGTGCG
AAAGATCACGTACATCTTCTTCTCCCTAACGAACACGTGTTCTCATGTTTTACCGAGGAG
ATACATGACGATGTAACCCTCTTTAGTGTCATCTACCTAGATTTGCATATCACGGAGGTA
TATTATCACAACCATTACCTCACCTGGGCCTGAGATCATCCTAAAATCTCTACACATAGA
TAAATCTCAATGAACTACGAATAACTTGCTACATCCAGGTGTGATTAGATTTTTGATTCA
CAACACAAAAACTTAATTTTCGCAAAGCCGTTAGGGCCTGTATCCACTCAAAGAAACAAG
CGCGACCATTGGCGCATATTTCTGGT
GenBank Accession CC884223 [GenBank]
Graphic View Graphic view of gene At1g79170
Predicted Position of Insertion Chr1:29782398 - go to primer design
BLAST e Value 9e-25
Hit Clone Code (BAC ID) YUP8H12R
Hit Gene Code At1g79170 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transmembrane protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37