DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_148834c
Line Availability available from NASC (N653540) and ABRC (SALK_148834c)
Confirmed for Hit At5g52540
Parent of DUPLO pair 2119
Parent of pair(s) none

Gene hit At5g52540

 
Sequence (A. th genome BLAST matches underlined) 
GGCCTACCAGCATGTGTGGCAGTGTTTGTGTGTGACTATATCAACAACCCAGGCCCGTTA
CGAAACACCCGCAGATGTGTTATTAAGTCTCCTAGGGGTCAACTAGCGTCTTCCCCTAAA
CTGGGTAGCTGGAAGTCCAAATGCCATTCCTATGAAAGTTGCAATGGCAATCCCAAATAT
TCTTGCCAGATTCCCGGGAACTATCAACGAATTCCATCCCTTTGCCGTCGCCATTCCAGC
TGCGGTCGTGGGTCCTCCGACATTAGCATTTGATGCTAGAAGCAATAACCTTAGCTCGAT
GTTTAGCAGCTTTCCTATGCCCAATATCACAGCCAGATGTGTCCCAATTTGAACCAATGC
AAACAAGAATATGCTCGGCGCCGTGTTGATCACACTCCATATGTTTCCGCTTGCCCCCAC
CACTGTGAAGAACCCCTGGAAGAAAACTAGCTTGATTTATATCCAGGAGGGTGGCTCGCT
CTTGAAATTCTTGTCCCAAACCTGCATCAAATTTAAACCCTGGCTTCTCCCAAGGGGACA
AA
GenBank Accession CC886633 [GenBank]
Graphic View Graphic view of gene At5g52540
Predicted Position of Insertion Chr5:21321696 - go to primer design
BLAST e Value 1e-166
Hit Clone Code (BAC ID) T4M5
Hit Gene Code At5g52540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation keratin-associated protein, putative (DUF819)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37