DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_150899c
Line Availability available from NASC (N664330) and ABRC (SALK_150899c)
Confirmed for Hit At4g31920
Parent of DUPLO pair 2412
Parent of pair(s) none

Gene hit At4g31920

 
Sequence (A. th genome BLAST matches underlined) 
CCCATCAGCTGTGGCCGCGCTCTGGTGATAGTAACAACCCCCCTCCTTTTTCACACATCC
GCAATGTGTGTTTTTTTTTGTCTAAACGTCTTTTTTGTTTTTCCCCACAACAAGGGCCTT
CGGAAAAAAAGNAATGTTTGTGGTGCTGTGTTANNCAACGTTATAAATTTTCTTAAATAT
CCCAAAGAAAAAGGTGGGGAAAGTAAATGGTTTTTATTGTATACAATACCCGTGTCGTTA
ACGAATTGACTATATCATCTAAGGAACCAGTATCAGAAGCCAACACCCGGCTCTGCTGCT
GCGGCCCCGCCCGCCGGCCCTAATTGGGGGGTAAAGAGTGGTCCAAGGACGCACGATGGG
CCCCTGCGTGCGCCCTGANAAGACTNCAACCANTNNCCCCCGCAANACNANAANTNNNNG
NTTGAGGGGCCNACCCCGNCCTCGCCAAAAAGGGCCTTTGTGTCGGCATCGTTACACCTG
TTAGCGGCTGGCTTCCATAAGGCGGGTTTCTCCCCCCACCGAGCCCGTGCTTTTCGCCCC
CTGGTGCCTGGGGC
GenBank Accession CC887827 [GenBank]
Graphic View Graphic view of gene At4g31920
Predicted Position of Insertion Chr4:15444427 - go to primer design
BLAST e Value 1e-30
Hit Clone Code (BAC ID) F11C18
Hit Gene Code At4g31920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation response regulator 10
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37