DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_014827c
Line Availability available from NASC (N657156) and ABRC (SALK_014827c)
Confirmed for Hit At3g13980
Parent of DUPLO pair 2344
Parent of pair(s) none

Gene hit At3g13980

 
Sequence (A. th genome BLAST matches underlined)
GACGCGCAATCCAGACATATTCTCCTGCTCTTTGAAATCAGAGCTTGCCCAACTCGTATC
CTCTGCTTCAGGATCCTCTTCTATTTTATGGACGCTGGAGTGGTAAAATTTTCCCGGCTA
TGACTTGTTACACCAAAATCTTTGGCTCGGGGCATGACACCAAGATGCTCTTCCACGCGT
TTAGCTTCGTTGTTATCGTAGAGTCTTTCGTTGTTATAAGCGTAAGGCATGGTAAAGGAG
GAATCTTCGTCAAGGATCACATTGACTGGACAGAACCGTACGGATCTTTTTGATTTGCCG
CTAGACGATGGAGTTTTGCTCAAGCAAGACCTAGAGAAGGACGACGCGGAGGAGCATGTG
GAGGAGGAGTGTGGTTCTTCCACGACGGCGACGGTGGTAGTTTTCTTGTGCTTCTTACGG
TTAGTGGCGGCGTTGGTGAAAAGAGAGTTT
GenBank Accession CC052188 [GenBank]
Graphic View Graphic view of gene At3g13980
Predicted Position of Insertion Chr3:4619440 - go to primer design
BLAST e Value 1e-158
Hit Clone Code (BAC ID) MDC16
Hit Gene Code At3g13980 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SKI/DACH domain protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37