DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_015044c
Line Availability available from NASC (N671292) and ABRC (SALK_015044c)
Confirmed for Hit At1g80310
Parent of DUPLO pair 12009
Parent of pair(s) none

Gene hit At1g80310

 
Sequence (A. th genome BLAST matches underlined) 
TAACCCACCAGCACCGTGACAGACGGGCATAGCGCCAAACCAG
GenBank Accession ED575135 [GenBank]
Graphic View Graphic view of gene At1g80310
Predicted Position of Insertion Chr1:30195955 - go to primer design
BLAST e Value 5e-17
Hit Clone Code (BAC ID) F5I6
Hit Gene Code At1g80310 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation sulfate transmembrane transporter
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g03160

 
Sequence (A. th genome BLAST matches underlined) 
GATTAAGATTGCACACAACTTTTTTTGATGAAAGATAGGAAAATGTGATATTGAGTATAA
TTTGAAAAGATTAGTCTTAAGTACATGATTCCGTCATGTTGTTCAAGTGAGAAACCGAAA
CCACCAAAACCGCCACCACCACCAGGAAAACCACCCTCGAAATGCAAAGTGTATTGTTGT
CCACCACCACCACCACCATGGAACGGATTATATCCTCCACCGACGCCTCCTGCCATATCT
TCAAGATCCTCTCCTCTGTCAAATCTCGACCGATTATCGTCGTCTCCAAGAATCTGGTAA
AATTAGAAGGGTTGAATGTCAAGAGAATGAGAGAGACCATGACCATGTGTGTGAATATGA
AAGAGTGATGTGGAATTTTGTTGAACCTCATAAGCTGCAGCGATTTCTCGGAATTTGTTC
TCAGCTTCTTCTCTAT
GenBank Accession ED575134 [GenBank]
Graphic View Graphic view of gene At5g03160
Predicted Position of Insertion Chr5:752580 - go to primer design
BLAST e Value 1e-108
Hit Clone Code (BAC ID) F15A17
Hit Gene Code At5g03160 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DnaJ P58IPK-like protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on Thursday, 10 June 2021 13:37