DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_015182c
Line Availability available from NASC (N655000) and ABRC (SALK_015182c)
Confirmed for Hit At5g61590
Parent of DUPLO pair none
Parent of pair(s) 2446

Gene hit At5g61590

 
Sequence (A. th genome BLAST matches underlined) 
GCTCGGCCCGGGGCGTCTGTCCTCTCGTCGCCCTATAGTGNAGTCGTATTACAGTGGTTG
CCGAATCTTCTTCTGCCTCACCGTCTACAACGTCGCCTGAGGTTGTGTCTGCCTCACACC
GTGCACCAAAACAATTCGGTTTGCGGACTCGCGCCATTACTTATGCGTGCTTATGGAGGC
CCATGTTGGGGAATTTGCCCCGGATTGCGAGTGCCGGCATAGAAGGGACCCAGGCTTTGG
CTAGGCTNCTTTTGAGCGTGATATTGATGCTGCCAGGGCGTTCCGACTATGCTTGCCTTC
TAGCCTCAGGGGCATACATTCTGTTCTGGCTTCTCCTTTGCATGCCGTGTTGTATGAGGC
TCCGGTCATTTCATGGCGGGTTTGGGAGACAACCGATGTACCACAGCCTCCTGGAGCAGC
ATCAAGTACTTCGTCCTCGCGATCAGCTAACGGGGGAATAGTGCTGTCTTCTT
GenBank Accession CC793507 [GenBank]
Graphic View Graphic view of gene At5g61590
Predicted Position of Insertion Chr5:24764886 - go to primer design
BLAST e Value 8e-07
Hit Clone Code (BAC ID) K11J9
Hit Gene Code At5g61590 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Integrase-type DNA-binding superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CC793507 [GenBank]


Last Updated on Thursday, 10 June 2021 13:37