DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_046323c
Line Availability available from NASC (N669651) and ABRC (SALK_046323c)
Confirmed for Hit At1g80760
Parent of DUPLO pair 12214
Parent of pair(s) none

Gene hit At1g80760

 
Sequence (A. th genome BLAST matches underlined) 
TTACATAGATCTTCCCTTCTTGAATTCAGTTCTTGTACATAATAATACATGTTACTGATC
ATGATGTTGTGTCCAACAGACCTGCAACTTCTGCTTCGATGAACCCTGTAAGAACACTGG
GTCCAGCCATTGCAGCAAACAATTACAGAGCTATTTGGGTTTACCTCACTGCCCCCATTC
TTGGAGCGTTAATCGGAGCAGGTACATACACAATTGTCAAGTTGCCAGAGGAAGATGAAG
CACCCAAAGAGAGGAGGAGCTTCAGAACATGAAAAACACTCCCTTCTATATTACTCTGTT
AACATCACATAAATATATGTGTATAATATAATATCTGAAGTCGACCATGCTTATAAAATT
TGGAATGCCCTTTAACCAAAATTGCAAGTGTTTCATCAAAATGGTTGGTTTTTAGCCTCG
TACAGATCTTTTAAGGAAAATTACTAAGTAGCTAGC
GenBank Accession CC794254 [GenBank]
Graphic View Graphic view of gene At1g80760
Predicted Position of Insertion Chr1:30350895 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F23A5
Hit Gene Code At1g80760 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NOD26-like intrinsic protein 6;1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g23990

 
Sequence (A. th genome BLAST matches underlined) 
GTCGATGGTCATTTATGAACTATACTGATTACGATTCAACAGTGTCGTCTCCACAATGTG
AAAGTGCGCAATTGACGCTATTTTAGCAATTCCTTGACTTTCACATCGTATCACATTGGA
TTGTAAGTGTAGTTGAGACTTGGCTGGGTATTTGTATAGGGTACAGTCTCCGAGGGACGA
CGGGGGTATTCGGGATGGGGCGTGGGGAGAGAAGGGAGGTGGGGTAGCGGGCGGGGGCGG
GACGGCGCCCGCCCGCCCGCCACCCGGGGTGGGATGGTTGCCCCGTTACAGATCCAGTGA
TGGGAGACACGCCGATAAGGTAGCGATTATTGACACACAAGGCGCGCCTGCTGCGCCATA
CGGCGTCTCCGCCTGCAAGGCCAAGTGTGGACGCGAGAGGCGG
GenBank Accession queueing for submission to ENA/GenBank
Graphic View Graphic view of gene At3g23990
Predicted Position of Insertion Chr3:8671012 - go to primer design
BLAST e Value 2e-16
Hit Clone Code (BAC ID) F14O13
Hit Gene Code At3g23990 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation heat shock protein 60
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on Thursday, 10 June 2021 13:37