DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_057447c
Line Availability available from NASC (N666126) and ABRC (SALK_057447c)
Confirmed for Hit At1g55340
Parent of DUPLO pair 12364
Parent of pair(s) none

Gene hit At1g55340

 
Sequence (A. th genome BLAST matches underlined) 
TTGGNCTCTACATGAAAATATGAATGTATCACACCTCTCTGCTAGTACATAAACATTAAC
TTCTACAGAGAAACTAGAAAGAGAAAAATCTGATAGATACCTTCTTTGAAGTCTTCTTCT
CTCTTACTTCATATCTCTCTTTGCACAGATCTGATAACCAAGCTCCTGGACTCACCAGCT
GCATTATACATAACAATCATGAGATAAAAATGGTTATGAAGAACACAAACGTTAAGTTTT
CAAAGAGACTCACAAGCAATGTCTTCTGAACCAATTTGGCTCGCTTCTTAGGTCTTTGAG
GAAGCT
GenBank Accession ED590242 [GenBank]
Graphic View Graphic view of gene At1g55340
Predicted Position of Insertion Chr1:20653425 - go to primer design
BLAST e Value 1e-171
Hit Clone Code (BAC ID) F7A10
Hit Gene Code At1g55340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein (DUF1639)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BH790623 [GenBank]


Last Updated on Thursday, 10 June 2021 13:37