DUPLOdb - Line and FST details
Line specific information
Line ID | SALK_063974c |
Line Availability | available from NASC (N662734) and ABRC (SALK_063974c) |
Confirmed for Hit | At1g20780 |
Parent of DUPLO pair | 216 |
Parent of pair(s) | none |
Gene hit At1g20780
Sequence (A. th genome BLAST matches underlined) | GATACGGCATATACTAAACGTTCTGAGGGAGAACCGAACAGAGAGGCTGACAAGGAGAGC GGTTTGGATGGTGGAAAGGATCTTGCGGATTGAAGACATANNAAGAGAGGTGGNAGAGGA ACAGAGNCTGAGCGCTGCACTTGTGGACGCTTTCCAAAACGCTGATTTTAGAACGAGACA GATCGCTGAGAACGCGCTGAAACACATTGATAAGATCCCAAACTTCTCAAGCATATTCCC ACACATCGCATAGGGAAAATCTCTTTGAAACTGTCCCGCGAGCTATAGTGA |
GenBank Accession | ED594308 [GenBank] |
Graphic View | ![]() |
Predicted Position of Insertion | Chr1:7220357 - go to primer design |
BLAST e Value | 1e-142 |
Hit Clone Code (BAC ID) | F2D10 |
Hit Gene Code | At1g20780 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | senescence-associated E3 ubiquitin ligase 1 |
Insertion Classification | CDSi |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |