DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_098698c
Line Availability available from NASC (N666855) and ABRC (SALK_098698c)
Confirmed for Hit At1g22130
Parent of DUPLO pair 2633
Parent of pair(s) none

Gene hit At1g22130

 
Sequence (A. th genome BLAST matches underlined) 
CCACTCATGCATTCGCAGGTAGTGGGGCATACTGAGATTGTGCGTCTTGCCGTGCCGCCT
ACCAGGAGGGTTTTGCTCTTGTTTGTTTATGTGGCACATATGTGGTTATCGTGTGAACTT
GGTACCCCCTCCCAATTCATTTAAGGTCTTAGTGGGTTGCATAGCGTGGTCATTTTGGGG
CGTGTATTGCTGGAGATTCCTTAGTTTACCGTTTCCCGGGCCGTCAACTTATTCTTGACT
TTAAGGAAACAACATAATGAGGAACAAACTAATCACTATGATTAGAACTAACCTCTTTGT
TTTGAATATCTCTGCAAACAAACCAAAAAAGAAAAGAGAGGGTCATGAAAAATTTATTAT
ACCCATATGATCAAGTGTAATGTAACAAAAGAAAAACTGATATACATACGGGCGTCTATT
CTGGTCAGGAAAGTATAGAGCACTGAAAGAAAACAAATCAAATAACCAAAGTCAC
GenBank Accession ED601903 [GenBank]
Graphic View Graphic view of gene At1g22130
Predicted Position of Insertion Chr1:7813616 - go to primer design
BLAST e Value 1e-137
Hit Clone Code (BAC ID) F2E2
Hit Gene Code At1g22130 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation AGAMOUS-like 104
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g25610

 
Sequence (A. th genome BLAST matches underlined) 
CAACTACAAATCACGCGCTGATGAATGCGCGTGAATT
GenBank Accession BZ377642 [GenBank]
Graphic View Graphic view of gene At2g25610
Predicted Position of Insertion Chr2:10902595 - go to primer design
BLAST e Value 4e-11
Hit Clone Code (BAC ID) F3N11
Hit Gene Code At2g25610 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ATPase, F0/V0 complex, subunit C protein
Insertion Classification TS2TE (5')
Confirmation Status failed


Last Updated on Thursday, 10 June 2021 13:37