DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_113426c
Line Availability available from NASC (N665011) and ABRC (SALK_113426c)
Confirmed for Hit At1g55890
Parent of DUPLO pair 2260
Parent of pair(s) none

Gene hit At1g55890

 
Sequence (A. th genome BLAST matches underlined)
GAAAGTTATCAATCAAACCAGATATTGTATCTTACAATACTTTGATTAAGGCATTGTGTG
AGAAGGATTCTTTACCTGAAGCTGTTGCATTGCTTGATGAGATTGAGAACAAGGGACTAA
AACCTGATATAGTTACATTCAACACACTTTTACTGTCTTCGTATCTAAAGGGACAGTTTG
AGCTAGGGGAAGAGATATGGGCTAAAATGGTGGAGAAGAATGTAGCAATAGACATCAGGA
CTTACAATGCTAGGCTGCTTGGATTAGCCAATGAGGCGAAATCGAAAGAGCTAGTAAATC
TCTTTGGAGAACTTAAGGCTAGTGGGCTCAAACCCTGATGTTTTCAGTTTCAATGCTATG
ATTAGAGGATCTATCAACGAANGAAAAATGGACGAAGCTGAAGCGTGGTACAAAGAAATT
GTGAAGCAT
GenBank Accession CC884499 [GenBank]
Graphic View Graphic view of gene At1g55890
Predicted Position of Insertion Chr1:20901878 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F14J16
Hit Gene Code At1g55890 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Tetratricopeptide repeat (TPR)-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37