DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_147277c
Line Availability available from NASC (N656050) and ABRC (SALK_147277c)
Confirmed for Hit At5g51600
Parent of DUPLO pair 2512
Parent of pair(s) none

Gene hit At5g51600

 
Sequence (A. th genome BLAST matches underlined) 
GTGTTATTAATGGGTGATTGTTTCCTTGAGGGTAGTNCNCNTGNNNCAATGNTACANAGN
NNCCCTCCNTTTCTTCCTGCAGGAATAAGATTCATTTGCCAATGCAATTAGGAAATCTAT
TCATACTATGATGATAACCAATGATTTACATTTGATTAAGAGACTTAGTTACCATNTTGA
TACAAGCTCCCATCATNTNNATGTCGGTGAAAATCTGCTTTTTCTTTGGTTANGGGCTTA
CGAGTCTGATGCATTGCTGCNTCCTAANGAANAGTCTTTCTGGTTAAATGCAACCACCGG
NTCGGACATTTCGTGGAACCTTTTTTACCAACAANGNGGTTTAGATGGGGCTGGGGTTTG
GAACCCGTAAAGTGCCTCTTGTTCTGCTATGAGCTGTCCCTGAACTTTTTCCTGACCCCT
TTAAAAGGTAA
GenBank Accession CC798673 [GenBank]
Graphic View Graphic view of gene At5g51600
Predicted Position of Insertion Chr5:20961516 - go to primer design
BLAST e Value 5e-57
Hit Clone Code (BAC ID) K17N15
Hit Gene Code At5g51600 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Microtubule associated protein (MAP65/ASE1) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37