DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_149928c
Line Availability available from NASC (N658974) and ABRC (SALK_149928c)
Confirmed for Hit At5g47550
Parent of DUPLO pair none
Parent of pair(s) 2082

Gene hit At5g47550

 
Sequence (A. th genome BLAST matches underlined) 
GCAACCAGGCTGTGGCCTATAGTCGAGGCGTATATACTTGATTACATAGTTTGGTTACTC
GCCGTTCTATATTTTTGAAAATTACCATTACAAACGTTACGGACCCTCAAGTCGTAGAGA
TCGGTGAATTCGCGGTCTCCGAGTACAACAAACGGAGCGAATCGGGACTCAAGTTCGAGA
CGGTTGTTAGCGGCGAGACTCAGGTCGTATCTGGTACAAATTACCGTCTTAAGGTGGCGG
CTAATGACGGCGACGGAGTGAGCAAGAACTACTTGGCAATCGTATGGGACAAGCCGTGGA
TGAAATTCAGAAATCTCACTTCCTTCGAGCCTGCCAATAATGGTCGCTTCCTTTAAGCTT
TTAACATGTAACCGCTCTTTATTATTACACNTGCCCCCGTGTGA
GenBank Accession ED605388 [GenBank]
Graphic View Graphic view of gene At5g47550
Predicted Position of Insertion Chr5:19286859 - go to primer design
BLAST e Value 1e-164
Hit Clone Code (BAC ID) MNJ7
Hit Gene Code At5g47550 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cystatin/monellin superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit ED605388 [GenBank]


Last Updated on Thursday, 10 June 2021 13:37