GABI DUPLOdb - pair details


Details for pair 1398
  
  Pair Info Parent 1 Parent 2
Pair ID 1398    
Parent loci   At1g55740 [Araport] [TAIR] At3g57520 [Araport] [TAIR]
Gene Annotations   seed imbibition 1 seed imbibition 2;
Pair-related paper(s)  
Similarity (TAIRv10) 74 %    
Gap (TAIRv10) 3.7 %    
Component 3    
Genetically unlinked Yes    
Assigned allele   SALK_090247c / At1g55740 276A02 / At3g57520
Insertion classification   TS2TE (3') CDSi
Parent line's graphic view   Graphic view of gene At1g55740 Graphic view of gene At3g57520
Parent line's confirm. status   confirmed, show confirmation seq's confirmed, show confirmation seq's
Primer and wt-amplicons   show primer details show primer details
Doublemutant ID 1398/1a1.24
NASC set ID N2102820
Assigned allele   SALK_090247c 276A02
Allele genotype in parent1   Het  
Allele genotype in parent2     Hom
Allele genotype in DM1   Hom Hom
Comment(s) and/or quirks Not a true DUPLO pair because another close protein-coding homolog exists.
(At1g55740, At3g57520, At5g20250)

 


Last Updated on Thursday, 06 December 2018 16:11