GABI DUPLOdb - pair details


Details for pair 1808
  
  Pair Info Parent 1 Parent 2
Pair ID 1808    
Parent loci   At2g39790 [Araport] [TAIR] At5g05990 [Araport] [TAIR]
Gene Annotations   Mitochondrial glycoprotein family protein Mitochondrial glycoprotein family protein;
Pair-related paper(s)  
Similarity (TAIRv10) 50.6 %    
Gap (TAIRv10) 10.3 %    
Component 5    
Genetically unlinked Yes    
Assigned allele   791B01 / At2g39790 443B12 / At5g05990
Insertion classification   CDSi CDSi
Parent line's graphic view   Graphic view of gene At2g39790 Graphic view of gene At5g05990
Parent line's confirm. status   confirmed, show confirmation seq's confirmed, show confirmation seq's
Primer and wt-amplicons   show primer details show primer details
 
Doublemutant ID 1808/1a2.04-3
NASC set ID N2102834
Assigned allele   791B01 293A10
Allele genotype in parent   Hom Hom
Allele genotype in DM   Hom Hom
Comment(s) and/or quirks Not a true DUPLO pair because the two ORFs display an aa-sequence similarity below our threshold, or at least one of the two genes has no annotated ORF (e.g. transposable elements or pseudogenes).

 

Last Updated on Thursday, 06 December 2018 16:11