SimpleSearch - Line and FST details
Line specific information
| Line ID | 225G05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N421581) |
| Segregation Analysis | 50:40:38 |
| Confirmed for Hit | At1g74640 At3g01920 At4g31420 |
| Parent of DUPLO pair | 2394 |
| Parent of pair(s) | none |
Gene hit At1g74640
| Sequence (A. th genome BLAST matches underlined) | >39-K014239-022-225-G05-8409 TTGATCCATGTAGATTTCCCGAACATGAAGTCCTTTACAATTGAATATATCCTGTCCACA GTCTCTCTGTAGCTATGGGATCCTCACCTATAGTGAGAAACAGCTGCCTCTCACAAAGTT TCGTCTCATCACCGACGCAAGATGTTCGCGAGACACATGAACGCGCGAGTTACCATTCAA ATGACAGGGCACAAGAGCTGACCGCCCTGCGCTTGGACATTGTGCTTGAGCCCCTCCGAT TTGTCGAGAACGTTACATTCTTCTTGGTACTTGAACTTCATGTTACACGCGTTACATGTT AAACCAGGCATCTTCTCTCCTTCAATATCGATCGATTCTATGGGATCCTCCCTGTAAGAG AGANNCTGAANCAGCCATGGAAGCGAAATTATACAAAAAATTACGGTTTTTCGAAGATCT GAAGCGAGAAAGACCGAAACGACGATTCAAAGGTCGAGACTTTTGAACCAGAACCACGAA GACGTGCTTGATATTCCTCGTCCAAGTTTGGGAGAGTCTGTCAGAAATTTACAACTACAG CCCCAACACAATTTCGTATATT |
| GenBank Accession | AL761470 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:28033168 - go to primer design |
| BLAST e Value | 9e-70 |
| Hit Clone Code (BAC ID) | F1M20 |
| Hit Gene Code | At1g74640 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | alpha/beta-Hydrolases superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g01920
| Sequence (A. th genome BLAST matches underlined) | >56-K118628-0022-225-G05C-8409 CATTTACAATTGAATATTCCTGTCCGGACATGAAGCCATTGGTAAATAATGACAGTGTGA AAGGGCCTAAAGAAAATGAATGGATGATCGACCCAACCGCAATAGGTGACATATATGGAC CAGAGGTATTTATAGCTCTCACTCTTTCTCAGCGACTAAAGAACATCTTTGGTTGCTCTA TTCTCTGTTTCGGTTTCCTTTTACAGGGTCTGGATTTTGTGGTAGACGGAGGTATACGAG TGGCTGAACCATCCACCATCGTGGATATGACAGGACCATATCCCAAGGTCATAAGGGAAG GGAAGGTAATATATTATCTAAACATTCTGTGCTTCATCCATCCAAGGACCTTAACTTGAC CGTGTGGTTGGTTTGTATAGGGACCT |
| GenBank Accession | HG968830 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr3:318583 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F28J7 |
| Hit Gene Code | At3g01920 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | DHBP synthase RibB-like alpha/beta domain-containing protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | AL761471 [GenBank] |
Gene hit At4g31420
| Sequence (A. th genome BLAST matches underlined) | >39-K014239-022-225-G05-8409 TTGATCCATGTAGATTTCCCGAACATGAAGTCCTTTACAATTGAATATATCCTGTCCACA GTCTCTCTGTAGCTATGGGATCCTCACCTATAGTGAGAAACAGCTGCCTCTCACAAAGTT TCGTCTCATCACCGACGCAAGATGTTCGCGAGACACATGAACGCGCGAGTTACCATTCAA ATGACAGGGCACAAGAGCTGACCGCCCTGCGCTTGGACATTGTGCTTGAGCCCCTCCGAT TTGTCGAGAACGTTACATTCTTCTTGGTACTTGAACTTCATGTTACACGCGTTACATGTT AAACCAGGCATCTTCTCTCCTTCAATATCGATCGATTCTATGGGATCCTCCCTGTAAGAG AGANNCTGAANCAGCCATGGAAGCGAAATTATACAAAAAATTACGGTTTTTCGAAGATCT GAAGCGAGAAAGACCGAAACGACGATTCAAAGGTCGAGACTTTTGAACCAGAACCACGAA GACGTGCTTGATATTCCTCGTCCAAGTTTGGGAGAGTCTGTCAGAAATTTACAACTACAG CCCCAACACAATTTCGTATATT |
| GenBank Accession | AL761470 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr4:15247511 - go to primer design |
| BLAST e Value | 2e-33 |
| Hit Clone Code (BAC ID) | F8F16 |
| Hit Gene Code | At4g31420 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Zinc finger protein 622 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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