GABI DUPLOdb - pair details


Details for pair 2121
  
  Pair Info Parent 1 Parent 2
Pair ID 2121    
Parent loci   At5g19410 [Araport] [TAIR] At5g52860 [Araport] [TAIR]
Gene Annotations   ABC-2 type transporter family protein ABC-2 type transporter family protein;
Pair-related paper(s)  
Similarity (TAIRv10) 62.1 %    
Gap (TAIRv10) 11.1 %    
Component 4    
Genetically unlinked Yes    
Assigned allele   104B04 / At5g19410 SALK_015052 / At5g52860
Insertion classification   unknown CDSi
Parent line's graphic view   Graphic view of gene At5g19410 Graphic view of gene At5g52860
Parent line's confirm. status   confirmed, show confirmation seq's confirmed, show confirmation seq's
Primer and wt-amplicons   show primer details show primer details
Doublemutant ID 2121/1a1.15.1
NASC set ID N2102930
Assigned allele   104B04 SALK_015052
Allele genotype in parent1   Hom  
Allele genotype in parent2     Hom
Allele genotype in DM1   Hom Hom
Comment(s) and/or quirks Not a true DUPLO pair because another close protein-coding homolog exists.
(At5g19410, At5g52860, At4g25750, At1g53270)

 

Last Updated on Thursday, 06 December 2018 16:11