GABI DUPLOdb - pair details


Details for pair 2591
  
  Pair Info Parent 1 Parent 2
Pair ID 2591    
Parent loci   At1g55110 [Araport] [TAIR] At3g13810 [Araport] [TAIR]
Gene Annotations   indeterminate(ID)-domain 7 indeterminate(ID)-domain 11;
Pair-related paper(s)  
Similarity (TAIRv10) 63.2 %    
Gap (TAIRv10) 20.9 %    
Component 1    
Genetically unlinked Yes    
Assigned allele   141B10 / At1g55110 SALK_058044c / At3g13810
Insertion classification   CDSi CDSi
Parent line's graphic view   Graphic view of gene At1g55110 Graphic view of gene At3g13810
Parent line's confirm. status   confirmed, show confirmation seq's confirmed, show confirmation seq's
Primer and wt-amplicons   show primer details show primer details
Doublemutant ID 2591/1a3.01
NASC set ID N2102883
Assigned allele   141B10 SALK_058044c
Allele genotype in parent1   Het  
Allele genotype in parent2     Hom
Allele genotype in DM1   Het Hom
Comment(s) and/or quirks No homozygous double mutant could be obtained (evidence for gametophytic or embryo lethal of the DM).
Not a true DUPLO pair because the two ORFs display an aa-sequence similarity below our threshold, or at least one of the two genes has no annotated ORF (e.g. transposable elements or pseudogenes).

 

Last Updated on Thursday, 06 December 2018 16:11