GABI DUPLOdb - pair details


Details for pair 2766
  
  Pair Info Parent 1 Parent 2
Pair ID 2766    
Parent loci   At3g11930 [Araport] [TAIR] At3g58450 [Araport] [TAIR]
Gene Annotations   Adenine nucleotide alpha hydrolases-like superfamily protein Adenine nucleotide alpha hydrolases-like superfamily protein;
Pair-related paper(s)  
Similarity (TAIRv10) 58.9 %    
Gap (TAIRv10) 17.8 %    
Component 1    
Genetically unlinked Yes    
Assigned allele   884A06 / At3g11930 756D02 / At3g58450
Insertion classification   CDSi CDSi
Parent line's graphic view   Graphic view of gene At3g11930 Graphic view of gene At3g58450
Parent line's confirm. status   confirmed, show confirmation seq's confirmed, show confirmation seq's
Primer and wt-amplicons   show primer details show primer details
 
Doublemutant ID 2766/1a1.11
NASC set ID N2102905
Assigned allele   884A06 562A03
Allele genotype in parent   Hom Hom
Allele genotype in DM   Hom Hom
Comment(s) and/or quirks Not a true DUPLO pair because the two ORFs display an aa-sequence similarity below our threshold, or at least one of the two genes has no annotated ORF (e.g. transposable elements or pseudogenes).

 

Last Updated on Thursday, 06 December 2018 16:11