GABI DUPLOdb - pair details


Details for pair 2678
  
  Pair Info Parent 1 Parent 2
Pair ID 2678    
Parent loci   At5g57480 [Araport] [TAIR] At4g25835 [Araport] [TAIR]
Gene Annotations   P-loop containing nucleoside triphosphate hydrolases superfamily protein P-loop containing nucleoside triphosphate hydrolases superfamily protein;
Pair-related paper(s)  
Similarity (TAIRv10) 87 %    
Gap (TAIRv10) 3.4 %    
Component 3    
Genetically unlinked Yes    
Assigned allele   787G02 / At5g57480 SALK_078726c / At4g25835
Insertion classification   CDSi CDSi
Parent line's graphic view   Graphic view of gene At5g57480 Graphic view of gene At4g25835
Parent line's confirm. status   confirmed, show confirmation seq's confirmed, show confirmation seq's
Primer and wt-amplicons   show primer details show primer details
Doublemutant ID 2678/1a1.04.1
NASC set ID N2102935
Assigned allele   787G02 SALK_078726c
Allele genotype in parent1   Hom  
Allele genotype in parent2     Hom
Allele genotype in DM1   Hom Hom
Comment(s) and/or quirks Not a true DUPLO pair because another close protein-coding homolog exists.
(At5g57480, At4g25835, At4g30250)

 

Last Updated on Thursday, 06 December 2018 16:11